#include <imagestackvolumesource.h>

Inheritance diagram for inviwo::ImageStackVolumeSource:

Public Member Functions
	ImageStackVolumeSource (InviwoApplication *app)

void	addFileNameFilters ()

virtual void	process () override

virtual const ProcessorInfo	getProcessorInfo () const override

Public Member Functions inherited from inviwo::Processor
	Processor (const std::string &identifier="", const std::string &displayName="")

std::string	getClassIdentifier () const

std::string	getCategory () const

CodeState	getCodeState () const

Tags	getTags () const

void	setIdentifier (const std::string &identifier)

const std::string &	getIdentifier () const

void	setDisplayName (const std::string &displayName)

const std::string &	getDisplayName () const

virtual std::vector< std::string >	getPath () const override

virtual void	setProcessorWidget (std::unique_ptr< ProcessorWidget > processorWidget)

ProcessorWidget *	getProcessorWidget () const

bool	hasProcessorWidget () const

virtual void	setNetwork (ProcessorNetwork *network)

ProcessorNetwork *	getNetwork () const

virtual void	initializeResources ()

Port *	getPort (const std::string &identifier) const

Inport *	getInport (const std::string &identifier) const

Outport *	getOutport (const std::string &identifier) const

const std::vector< Inport * > &	getInports () const

const std::vector< Outport * > &	getOutports () const

const std::string &	getPortGroup (Port *port) const

std::vector< std::string >	getPortGroups () const

const std::vector< Port * > &	getPortsInGroup (const std::string &portGroup) const

const std::vector< Port * > &	getPortsInSameGroup (Port *port) const

bool	allInportsConnected () const

bool	allInportsAreReady () const

bool	isSource () const

bool	isSink () const

bool	isReady () const

virtual void	doIfNotReady ()

virtual void	setValid () override

virtual void	invalidate (InvalidationLevel invalidationLevel, Property *modifiedProperty=nullptr) override

void	addInteractionHandler (InteractionHandler *interactionHandler)

void	removeInteractionHandler (InteractionHandler *interactionHandler)

bool	hasInteractionHandler () const

const std::vector< InteractionHandler * > &	getInteractionHandlers () const

virtual void	invokeEvent (Event *event) override

virtual void	propagateEvent (Event event, Outport source) override

virtual Processor *	getProcessor () override

virtual const Processor *	getProcessor () const override

virtual void	serialize (Serializer &s) const override

template<typename T , typename std::enable_if_t< std::is_base_of< Inport, T >::value, int > = 0>
T &	addPort (std::unique_ptr< T > port, const std::string &portGroup="default")

template<typename T , typename std::enable_if_t< std::is_base_of< Outport, T >::value, int > = 0>
T &	addPort (std::unique_ptr< T > port, const std::string &portGroup="default")

template<typename T >
T &	addPort (T &port, const std::string &portGroup="default")

Port *	removePort (const std::string &identifier)

Inport *	removePort (Inport *port)

Outport *	removePort (Outport *port)

Public Member Functions inherited from inviwo::PropertyOwner
virtual	~PropertyOwner ()
	Removes all properties and notifies its observers of the removal.

virtual void	addProperty (Property *property, bool owner=true)

virtual void	addProperty (Property &property)

template<typename... Ts>
void	addProperties (Ts &... properties)

virtual void	insertProperty (size_t index, Property *property, bool owner=true)
	insert property `property` at position `index` If `index` is not valid, the property is appended. More...

virtual void	insertProperty (size_t index, Property &property)
	insert property `property` at position `index` If `index` is not valid, the property is appended. More...

virtual Property *	removeProperty (const std::string &identifier)

virtual Property *	removeProperty (Property *property)

virtual Property *	removeProperty (Property &property)

virtual Property *	removeProperty (size_t index)
	remove property referred to by `index` More...

const std::vector< Property * > &	getProperties () const

const std::vector< CompositeProperty * > &	getCompositeProperties () const

std::vector< Property * >	getPropertiesRecursive () const

Property *	getPropertyByIdentifier (const std::string &identifier, bool recursiveSearch=false) const

Property *	getPropertyByPath (const std::vector< std::string > &path) const

template<class T >
std::vector< T * >	getPropertiesByType (bool recursiveSearch=false) const

size_t	size () const

Property *	operator[] (size_t)

const Property *	operator[] (size_t) const

iterator	begin ()

iterator	end ()

const_iterator	cbegin () const

const_iterator	cend () const

virtual bool	isValid () const

InvalidationLevel	getInvalidationLevel () const

void	setAllPropertiesCurrentStateAsDefault ()

void	resetAllPoperties ()

virtual InviwoApplication *	getInviwoApplication ()

Public Member Functions inherited from inviwo::PropertyOwnerObservable
void	notifyObserversWillAddProperty (Property *property, size_t index)

void	notifyObserversDidAddProperty (Property *property, size_t index)

void	notifyObserversWillRemoveProperty (Property *property, size_t index)

void	notifyObserversDidRemoveProperty (Property *property, size_t index)

Public Member Functions inherited from inviwo::Observable< PropertyOwnerObserver >
	Observable (const Observable< PropertyOwnerObserver > &other)

	Observable (Observable< PropertyOwnerObserver > &&other)

Observable< PropertyOwnerObserver > &	operator= (const Observable< PropertyOwnerObserver > &other)

Observable< PropertyOwnerObserver > &	operator= (Observable< PropertyOwnerObserver > &&other)

void	addObserver (PropertyOwnerObserver *observer)

void	removeObserver (PropertyOwnerObserver *observer)

virtual void	startBlockingNotifications () override final

virtual void	stopBlockingNotifications () override final

Public Member Functions inherited from inviwo::MetaDataOwner
	MetaDataOwner (const MetaDataOwner &rhs)=default

MetaDataOwner &	operator= (const MetaDataOwner &rhs)=default

void	copyMetaDataFrom (const MetaDataOwner &src)

void	copyMetaDataTo (MetaDataOwner &dst)

template<typename T >
T *	createMetaData (const std::string &key)

template<typename T , typename U >
void	setMetaData (const std::string &key, U value)

template<typename T >
bool	unsetMetaData (const std::string &key)
	unset, i.e. remove the metadata entry matching the given key and type More...

template<typename T , typename U >
U	getMetaData (const std::string &key, U val) const

template<typename T >
T *	getMetaData (const std::string &key)

template<typename T >
const T *	getMetaData (const std::string &key) const

MetaDataMap *	getMetaDataMap ()

const MetaDataMap *	getMetaDataMap () const

template<typename T >
bool	hasMetaData (const std::string &key) const

Public Member Functions inherited from inviwo::Observable< ProcessorObserver >
	Observable (const Observable< ProcessorObserver > &other)

	Observable (Observable< ProcessorObserver > &&other)

Observable< ProcessorObserver > &	operator= (const Observable< ProcessorObserver > &other)

Observable< ProcessorObserver > &	operator= (Observable< ProcessorObserver > &&other)

void	addObserver (ProcessorObserver *observer)

void	removeObserver (ProcessorObserver *observer)

virtual void	startBlockingNotifications () override final

virtual void	stopBlockingNotifications () override final

Static Public Attributes
static const ProcessorInfo	processorInfo_

Protected Member Functions
std::shared_ptr< Volume >	load ()

bool	isValidImageFile (std::string)

virtual void	deserialize (Deserializer &d) override

Protected Member Functions inherited from inviwo::Processor
void	addPortToGroup (Port *port, const std::string &portGroup)

void	removePortFromGroups (Port *port)

Protected Member Functions inherited from inviwo::PropertyOwner
	PropertyOwner (const PropertyOwner &rhs)

PropertyOwner &	operator= (const PropertyOwner &that)=delete

Protected Member Functions inherited from inviwo::Observable< PropertyOwnerObserver >
void	forEachObserver (C callback)

Protected Member Functions inherited from inviwo::ObservableInterface
void	addObservationHelper (Observer *observer)

void	removeObservationHelper (Observer *observer)

Protected Member Functions inherited from inviwo::ProcessorObservable
void	notifyObserversAboutPropertyChange (Property *p)

void	notifyObserversInvalidationBegin (Processor *p)

void	notifyObserversInvalidationEnd (Processor *p)

void	notifyObserversIdentifierChanged (Processor *p, const std::string &oldIdentifier)

void	notifyObserversDisplayNameChanged (Processor *p, const std::string &oldDisplayName)

void	notifyObserversProcessorPortAdded (Processor p, Port port)

void	notifyObserversProcessorPortRemoved (Processor p, Port port)

void	notifyObserversAboutToProcess (Processor *p)

void	notifyObserversFinishedProcess (Processor *p)

void	notifyObserversSourceChange (Processor *p)

void	notifyObserversSinkChange (Processor *p)

void	notifyObserversReadyChange (Processor *p)

Protected Member Functions inherited from inviwo::Observable< ProcessorObserver >
void	forEachObserver (C callback)

Additional Inherited Members
Public Types inherited from inviwo::PropertyOwner
using	iterator = std::vector< Property * >::iterator

using	const_iterator = std::vector< Property * >::const_iterator

Protected Attributes inherited from inviwo::Processor
std::unique_ptr< ProcessorWidget >	processorWidget_

StateCoordinator< bool >	isReady_

StateCoordinator< bool >	isSink_

StateCoordinator< bool >	isSource_

Protected Attributes inherited from inviwo::PropertyOwner
std::vector< Property * >	properties_

std::vector< EventProperty * >	eventProperties_

std::vector< CompositeProperty * >	compositeProperties_

std::vector< std::unique_ptr< Property > >	ownedProperties_

Protected Attributes inherited from inviwo::MetaDataOwner
MetaDataMap	metaData_

Protected Attributes inherited from inviwo::ProcessorObservable
friend	ProcessorNetworkEvaluator

friend	Property

Detailed Description

Converts a stack of 2D images to a 3D volume

The format of the volume will be equivalent to the first input image. The volume resolution will be equal to the size of the first image times the number of images. The physical size of the volume is determined by the the voxel spacing property.

The input images are converted to a volume representation based on the input channel selection. Single channels, i.e. red, green, blue, alpha, and grayscale, will result in a scalar volume whereas rgb and rgba will yield a vec3 or vec4 volume, respectively.

Outports

volume Volume generated from a stack of input images.

Properties

File Pattern Pattern used for multi-file matching of images
Skip Unsupported Files If true, matching files with unsupported image formats are not considered. Otherwise an empty volume slice will be inserted for each file.
Voxel Spacing Used to match the sampling distance of the acquired data and affects the physical size of the volume.
Data Information Metadata of the generated volume data set.

Member Function Documentation

◆ process()

void inviwo::ImageStackVolumeSource::process ( )

overridevirtual

Deriving classes should override this function to do the main work of the processor. This function is called by the ProcessorNetworkEvaluator when the network is evaluated and the processor is invalid, i.e. some of its inports or properties has been modified, and is ready i.e. all non optional inports have valid data.

See also: ProcessorNetworkEvaluator; Inport; Property

Reimplemented from inviwo::Processor.

Member Data Documentation

◆ processorInfo_

const ProcessorInfo inviwo::ImageStackVolumeSource::processorInfo_

static

Initial value:

{
    "org.inviwo.ImageStackVolumeSource",  
    "Image Stack Volume Source",          
    "Data Input",                         
    CodeState::Stable,                    
    "Layer, Image, Volume",               
}

The documentation for this class was generated from the following files:

imagestackvolumesource.h
imagestackvolumesource.cpp

Public Member Functions

Static Public Attributes

Protected Member Functions